Diplay multiple sequence alignment with color

khofmann at biomed.biolan.uni-koeln.de khofmann at biomed.biolan.uni-koeln.de
Tue Mar 16 03:47:55 EST 1993


In article <1993Mar15.204038.14261 at gserv1.dl.ac.uk>, gartmann at VMS.MPIIB-FREIBURG.MPG.dbp.de (Christoph Gartmann) writes:
>Hello,
>
>just a simple question: is there a program that can display multiple sequence
>aligments using different colors for different sequence characters? It should
>run on VMS (REGIS) or MacIntosh.
>
>Regards
> Christoph

Did you try BOXSHADE? it runs on VMS, takes several multiple sequence 
alignments formats (including PILEUP,CLUSTAL) and creates (among others)
color ReGIS output.
It is available bye FTP from biomed.biolan.uni-koeln.de or from other
major bio-FTP server (e.g. EMBNET)

Best regards,
              Kay




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