How to calculate a matrix from blosum to feed gcg pileup?

ES at JII.AFRC.AC.UK ES at JII.AFRC.AC.UK
Wed May 26 07:16:00 EST 1993


Dear helpers,

Could anyone help me finding/calculate a PileupPep.Cmp matrix from the
values of the BLOSUM (i.e.BLOSUM62) matrix (Henikoff & Henikoff, 1992
PNAS 89, 10915) which could be use as a protein symbol comparison table
by the GCG Pileup program? Thanks

Eric Schoonejans

es @ jii.afrc.ac.uk




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