Surface "Accessibility"

Steve Thompson: VADMS genetics THOMPSON at JAGUAR.CSC.WSU.EDU
Fri May 28 18:17:01 EST 1993


In Message <9305282107.AA21809 at net.bio.net> Ian McDonald,
mcdonald at bsm.bioc.ucl.ac.uk, wrote:

>Besides the ACCESS suite of S Hubbard, what other
>programs are in circulation that can calculate
>accessibility from a PDB file ?

See David Eisenberg, Michael Gribskov and Roland Luethy's 3D Profile method. 
The first step in creating a 3D Profile involves calculating "environment"
parameters for every residue --- should corelate pretty well with access'.  I
believe Dr. Eisenberg's secretary handles distribution of the software.  Dr.
Eisenberg's e-mail address is David at UCLAUE.MBI.UCLA.Edu.

						Steve Thompson 
                                                thompson at wsuvms1.csc.wsu.edu





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