finding trans-membrane domains of proteins

[Cornelius Krasel]

john f hess phd (jfhess at ucdavis.edu) wrote:
: This seems to be the place to ask this question. I am interested in
: programs that will analyze protein sequences and tell me where potential
: trans-membrane domains are. 

: I am currently using MacDNAsis on my mac and have GCG on a vax on main
: campus.

PEPTIDESTRUCTURE from the GCG package will do what you want if you want
to use the Hopp&Woods- or Kyte&Doolittle-Algorithm.

--Cornelius.

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