RNA secondary structure software

Peter.DeRijk derijkp at reks.uia.ac.be
Fri Dec 30 10:49:32 EST 1994


Neil Brockdorff x3247 (nbrockdo at hgmp.mrc.ac.uk) wrote:
: I am looking for the best available RNA secondary structure programs. I have used GCG
: and pc software but find it somewhat restricted and unfriendly.  Any suggestions?
: 
: 

It depends on which approach you are interested in. If you want to use the
comparative approach, DCSE (Dedicated Comparative Sequence Editor) might
be of interest to you. It is a multiple sequence alignment editor with
support for incorporation, checking and finding RNA secondary structure.
For more info, check out URL
http://www-rrna.uia.ac.be/~peter/dcse/index.html

Peter





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