databases search - protein size

bionet at cgmvax.cgm.cnrs-gif.fr bionet at cgmvax.cgm.cnrs-gif.fr
Fri May 6 10:43:33 EST 1994


>
>I'm trying to find a way of searching databases for proteins (ideally from
>E.Coli) with a mass in a given range (say between 10 and 18 kDa).
>

ATLAS will do exactly this.

Get the CD-ROM from PIR. The program ATLAS runs on VAX/VMS, VAX/ULTRIX,
Sun, SGI, Mac, and PC.

Use the command SELECT which, at the moment, is not documented...

ATLAS> select
       Expression: MW
       Range: 100000-180000

You get the answer in a matter of seconds.

Good luck,

Jean-Loup


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