Cloning software for Win
Don Gilbert
gilbertd at sunflower.bio.indiana.edu
Thu Aug 31 07:50:01 EST 1995
You can try SeqPup. It may be of help to you, and it is free.
Version 0.4j of SeqPup has just been released (though I've yet
to update the documentation).
Features include
multiple sequence alignment editor
single sequence editor
read and write several sequence file formats
easy hand alignment features including colored bases and sliding
automatic multiple sequence alignment thru ClustalW app
automatic gel fragment alignment to contigs thru CAP app
consensus, reverse, complement, degap operations
restriction maps
pretty prints of alignments with shading, boxes, etc.
translate dna to/from protein using various codon tables
find strings and ORFs
internet sequence analysis services by email
user-definable links to external analysis programs
NOTICE: This release is still unfinish, and has bugs. Please careful of
trusting important work to it. Yet it may be useful to some of you as
is.
You can obtain this release thru anonymous ftp, gopher or http to
iubio.bio.indiana.edu, in folder /molbio/seqpup. Versions are available
for Macintosh, MS Windows, and these Unix/XWindows systems: Sun, SGI, DEC.
The Internet locators to this software are
<ftp://iubio.bio.indiana.edu/molbio/seqpup/>
<gopher://iubio.bio.indiana.edu/11/IUBio-Software+Data/molbio/seqpup/>
<http://iubio.bio.indiana.edu/1/IUBio-Software%2bData/molbio/seqpup/>
Source code for this software (DCLAP) is at
<ftp://iubio.bio.indiana.edu/util/dclap/source/>.
In article <4240ul$odb at helka.iif.hu>, Jeney Csaba <jencsa at net.sote.hu> wrote:
>Hi,
>
>I am looking for a general molecular biology sofware, which can map,
>find restriction site and perhaps can make constructs graphically. I have seen
>a proper one for Mac called GeneConstructionKit, but I do not know that such
>a program available for Windows 3.1 or later or not. I prefer shareware or freeware
>ones.
>
>Thanks in advance
>
>Csaba
--
-- d.gilbert--biocomputing--indiana u--bloomington--gilbertd at bio.indiana.edu
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