RNAdraw update!
Ole Matzura
ole at mango.mef.ki.se
Mon Mar 27 04:49:30 EST 1995
Hello!
A new version of RNAdraw is now available (V0.99-06).
It features the following:
1) Possibility to import .ct files generated with
M. Zukers mfold program.
2) Possibility to pair/unpair bases in the matrix view by
just clicking at the basepair desired. Changes will be
immediately applied to the (eventually open) structure view,
allowing you to monitor conformation/energy changes
interactively.
3) A crude algorithm for extracing structures from the
probability matrix.
4) Minor changes in structure viewing (applied probabilities
are now linewith coded, not linestyle coded) and corresponding
print routines.
5) Matrix Histogram : 1) possibility to extract the least/mean/highest
probabilities from the current structure
2) instant application of cutoff to matrix view
6) 'Safer' heat calculations
7) Some minor bug fixes
(hopefully not: 8) Some new minor bugs? )
Retrieve and enjoy!
For those of you not familiar with RNAdraw:
Rnadraw is a (free) RNA secondary structure/probability matrix calculation
and analysis program for Win32 (Windows NT/95/ 3.1 with Win32s)
featuring M. Zuker's and J. McCaskill's algorithms and
an easy-to-use and completely integrated user interface (no more
command line agony) with lots of viewing/editing/printing (and more)
possibilities.
For a complete introduction, screen shots, system requirements
and performance issues see the Rnadraw homepage:
http://broccoli.mfn.ki.se/rnadraw/rnadraw.html
Rnadraw is also available via anonymous ftp at
broccoli.mfn.ki.se
in the pub/rnadraw directory.
Please send any comments to me via E-mail at
ole at mango.mef.ki.se
Thank you! Good Luck!
Ole Matzura
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