TopPred II 1.2, a new update
Manuel .G CLAROS
claros at biologie.ens.fr
Tue May 30 12:50:26 EST 1995
A new release of the TopPred software is now available from the following
servers (and of course, all the corresponding mirrors):
Indiana: ftp.bio.indiana.edu/molbio/mac or /incoming
The essentials of this update are:
Application TopPred II
Update May 1995
Authors M.G. Claros and G. von Heijne
Description Prediction of transmembrane segments in integral
membrane proteins, and the putative topologies, using
Literature CABIOS 10(6), 685-686 (1994)
Notes 1- TopPred II is available as a "compatible" application, or as
a "rapid" one. The rapid one needs 68020 processor, or later,
2- A postcript file containing the orignal paper about this
software can be found with the programs. It could be printed
out with the LaserWriter Utility accompanying the apple printers,
or the old Print PS application.
3- Three diferent algorithms are implemented to calculate
domains. The recommended is the described by Gunnar von Heijne in
JMB 1992 (see the software on-line help), but it is also
the one of Patrick Argos in JMB 1994, and the one of F.
TIBS 1990 for amphiphilic domains.
TopPred II has been designed for Macintosh computers, using
THINK Pascal 4.0.2. If someone is interested in making a version
compatible with other platforms, he may contact me.
TopPred II 1.2 (May 1995)
# It has a new printed header
# An algorithm for amphiphilic transmembrane domains has been included
The corresponding modifications have been done in the on-line help.
- All the scroll bars are active when they should.
- The "Results" window updates are correct now.
- Deleting the excess of text in the same window is not apparent.
- Keyboard equivalents for the Edit menu do work now.
- My fax number has been corrected (the former was my phone number)
We'll always have Paris (Rick Blaine, Casablanca)
// \\ // \\ // \\ Un amigo es uno
Manuel G. CLAROS \': | \\ // | :,\\': | \\ que lo sabe todo
Ecole Normale Superieure \\ | | \\ // | | // \\ | | \\ sobre ti y a
Genetique Moleculaire \\ | :,\\': | // \\ | :,\\ pesar de ello
46 rue d'Ulm \\ // \\ // \\ // te quiere.
75230 Paris Cedex 05 claros at biologie.ens.fr E. Hubbard
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