help on pestfind

mathog at seqaxp.bio.caltech.edu mathog at seqaxp.bio.caltech.edu
Mon Apr 22 12:25:20 EST 1996


In article <4l4sjr$48l at news.u-strasbg.fr>, Francois Jeanmougin <Jeanmougin at igbmc.u-strasbg.fr> writes:
>In article <4l3n4c$8pc at gap.cco.caltech.edu> ,
>mathog at seqaxp.bio.caltech.edu writes:
>>After my signature you will find a translation of the original pestfind
>>program from BasicA to ANSI C.  If you can find an ANSI C Mac compiler
>>it should do the trick for you.
>
>	Thank you for this helpfull answer, David, but is there a publication or
>short help that explain how to chose : the minimum of AAs between
>positive flanks
>	and how to interpret the PEST-FIND score...
>

1.  Science 234:364-368 (1986)

2.  Seminars in CELL BIOLOGY vol 1. 1990, 433-440

There may be others - look up work by Martin Rechsteiner.

Regards,

David Mathog
mathog at seqaxp.bio.caltech.edu
Manager, sequence analysis facility, biology division, Caltech 




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