how to get raw data from PDB

Antoine de DARUVAR daruvar at embl-heidelberg.de
Wed Dec 11 00:32:34 EST 1996


>         I need a secondary structure of protein with know structure (I got
> it from EMBL databank) but it data didn't say anything about 2nd structure
> in text format ,I have to view with PDB viewer. How can I obtain the 2nd
> structure in text format.

you could use DSSP database which gives secondary structure for each PDB
entry (DSSP is available at http://www.sander.embl-heidelberg.de/dssp/).

Regards,

Antoine de Daruvar




More information about the Bio-soft mailing list