Helix-turn-helix software

mathog at seqaxp.bio.caltech.edu mathog at seqaxp.bio.caltech.edu
Thu Feb 15 11:19:10 EST 1996


In article <4fso8s$387 at hobbes.cc.uga.edu>, crawford at bscr.uga.edu writes:
>Hi!
>	I am looking for a program that can calculate the
>probability of a protein sequence to contain a
>helix-turn-helix motif using the method of Dodd 
>and Egan (1990, Nucleic Acids Research 18: 5019)
>or a similar method. I would prefer a public domain
>Mac program, but others would due as well.

I know of one called HelixTurnHelix.  which is part of the EGCG package. If
you have access to the GCG package at your site, they probably have EGCG
loaded as well. 

Otherwise, you might try contacting the authors of that paper to see if
they have a Mac program for you. 

Regards,

David Mathog
mathog at seqaxp.bio.caltech.edu
Manager, sequence analysis facility, biology division, Caltech 




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