Smith Waterman in C

[R. Scott Jokerst]

The sim.c algorythm (and others) is located at:
http://globin.cse.psu.edu/ftp/dist/sim/

Hope this helps,

Scott Jokerst
Biological Data Transport
http://www.data-transport.com
*************************

At 9:46 AM 7/9/96, Keith Robison wrote:
>Hemant Varma (varma at sb10.llnl.gov) wrote:
>: Hello Folks,
>:            I am looking for a C implementation of
>: Smith -Waterman algorithm for sequence alignment. If
>: anybody could please indicate where I can find such a
>: program, I would really appreciate it.
>
>Xiaoqiu Huang's sim is exactly this.  I don't know the FTP site offhand,
>but I think it's at Penn State (psu.edu domain name) somewhere.
>
>
>Keith Robison
>Harvard University
>Department of Molecular & Cellular Biology
>Department of Genetics
>
>robison at mito.harvard.edu

 R. Scott Jokerst (510-648-8229)   scott_jokerst at data-transport.com
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