Global Alignment using a FASTA type algorithm
Gautam Singh/NCGR
Gautam_Singh/NCGR at NOTES.NCGR.ORG
Tue Jul 9 14:46:20 EST 1996
Hi all:
The current form of FASTA finds regions of local similarity between two
sequences. Is there a similar program (c/c++ function) that computes the global
alignment using the FASTA algoritm. Essentially, I would like to get a SIM
(Huang, et. al.) type complete alignment from a program that uses FASTA ( or
its derivitive) as its core alignment engine.
Thanks!
Gautam
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