Marked alignments... how?
pingouin at .u-strasbg.fr
Tue Jul 16 10:16:10 EST 1996
In article <4sgdnc$4cb at hp.fciencias.unam.mx>,
adriank at servidor.unam.mx (Adrian Kornhauser) writes:
>Hi! I'm new at this, so I hope it works
>I have seen in some articles, multiple sequence alignements that have
>a simbol like "*,." in the positions where the amino acids are
>conserved or where all subtitutions are of aminoacids with the same
This is the output format from clustalw, the greater and best
multiple alignment programm (ok...IMHO).
find it at : ftp.ebi.ac.uk
PS: their is an online help on clustalw, and the way to make it work
properly with gcg sequences at our site :
I have also rewritten tofasta to make it read the Begin: and End: from
a GCG list. If you need that also, let me know...
tofasta or topir are necessary to make clustalw run with GCG.
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