Global Alignment using a FASTA type algorithm

William R. Pearson wrp at ALPHA0.BIOCH.VIRGINIA.EDU
Wed Jul 17 15:39:12 EST 1996

The latest version of FASTA is 3.0t4; verion 3 only includes the searching
programs, not the other alignment programs, which are in fasta20u5. The
current DOS/Win95 version is fasta20u4, which does not have FASTX.  That
should change soon.

If you want to modify one of the comparison methods for global alignments,
fasta30 is probably the easiest to work with.

Bill Pearson

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