Pairwise protein align. program wanted

Morten Stig Andersen moan at evolution.bmc.uu.se
Tue Jun 4 06:55:58 EST 1996


I am looking for a freeware pairwise alignment program (for unix) which
can report percent similarity as well as percent identity, like the
'bestfit' and 'gap' programs in GCG. 

I have Bill Pearson's 'align' program, but it reports identity only.

Any clues?

Thanks,

Morten Andersen

=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
 MORTEN STIG ANDERSEN           Department of Molecular Biology
 Fax: +46 18 557723             Biomedical Center, University of Uppsala
 Tel: +46 18 174379             BOX 590, S-751 24 Uppsala, SWEDEN







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