A self contained C++ (or c) sequence alignement function

James Knight knight at quad.cs.ucdavis.edu
Tue Jun 25 12:27:14 EST 1996


Keith Robison (robison at lipid.harvard.edu) wrote:
: You might look into SIM, written by Xiaoqu Huang (sp?).  It is a Smith-Waterman
: implementation, and as I remember it the main function comes pretty close
: to what you want.

You can find the code for SIM at http://globin.cse.psu.edu/ftp/dist/sim/sim.c

Jim







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