Mapping transcription factor sites

Mike Gruidl mgruidl at com1.med.usf.edu
Sat Oct 12 13:17:56 EST 1996


Dear Netters:

I am looking for a PC (windows or Dos) program for mapping transcription 
factor sites within a sequence of my choice.  I am aware of the the 
TransFac database and the new search utility.  but I am not finding this 
very usefull for my needs.  I would like something that gives me a 
printout of the alignment and the name of the transcription factor.

I am also aware of signalscan, but I am not able to recompile the C 
code. If someone out there has already done that I would be greatfull 
for a copy.

Is there a way to search the TFD database at NCBI?

Best regards

Mike Gruidl




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