alignment software for proteins

aiyar at ebv.oncology.wisc.edu aiyar at ebv.oncology.wisc.edu
Sat Apr 19 22:47:33 EST 1997


On Fri, 18 Apr 1997 04:04:45 -0800,
Lab Rat (labrat at cco.caltech.edu) wrote:

>Urgently need software for multiple alignment of proteins (Mac!)
>Please, advice!!!

Take a look at ClustalX - a GUI version of ClustalW 1.61.  The
most recent version of ClustalX (1.4b) is available from:
ftp://ftp-igbmc.u-strasbg.fr/pub/ClustalX

You will find Mac68K and MacPPC binaries in that directory, along
with source code.

If you have access to any unix platform, I urge you to consider
using DIALIGN.  This is available from:
ftp://ariane.gsf.de/pub/unix/dialign

Binaries for SunOS 5.x, Convex, Digital Unix, IRIX, HPUX and Linux
are available.

Ashok
-- 
Ashok Aiyar, Ph.D.
McArdle Laboratory for Cancer Research
aiyar at ebv.oncology.wisc.edu




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