rss?

Ashok Aiyar aiyar at ebv.oncology.wisc.edu
Fri Feb 21 11:35:28 EST 1997


On 21 Feb 1997 13:18:06 GMT, Richard P Grant <rgrant at molbiol.ox.ac.uk.remove_this_bit> wrote:
>I want to compile it under Digital Unix 4.0a - can someone please point
>me at the source? [0]

Perhaps what you are looking for is "prss".  This is part of Bill
Pearson's FASTA package - available from ftp://ftp.virginia.edu/pub/fasta

prss will shuffle a protein or DNA sequence for a user-defined number
of iterations and align them to the test sequence.

later,
Ashok
-- 
Ashok Aiyar, Ph.D.
McArdle Laboratory for Cancer Research
aiyar at ebv.oncology.wisc.edu




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