Secondary Structure Prediction Programs: What do you use?

ketchup Ketchup at cris.com
Tue Jan 21 17:22:43 EST 1997


Greetings Netters, 

I'm interested to know what sort of Secondary Structure Prediction
programs and web sites you are all using out there. I'm aware of PDB
and DSSP protein structure databases, but I'm more interested in what
prediction programs you may be using and find usefull. Just a quick
note here or to my email would be great, as I'm looking for a
'consensus of usage' more than abilities, discussion, etc.

Thanks in advance.

Karl Nicholas
ketchup at cris.com

ps> Some sites I am aware of:
nnPredict: Predict Protein Secondary Structure at UCSF 
PredictProtein: Predict Protein Secondary Structure at EMBL-Heidelberg

PSSP: Protein Secondary Structure Prediction at Baylor College of
Medicine 





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