perl extraction of protein sequence

Will Fischer wfischer at sunflower.bio.indiana.edu
Tue Jul 8 08:30:35 EST 1997


William R. Pearson (wrp at alpha0.bioch.virginia.edu) wrote:
: 
: I am looking for a perl script to read a Genbank file and build
: a file of the translation products.

You want to extract the translation supplied by GenBank, right?

My script to do this is available via the following URL:
http://www.bio.indiana.edu/~wfischer/Perl_Scripts/#gbgettrans
(to do the translation, see #nt2aa in the same document).

-- 
____________________________________________________________
Will Fischer			

Biology Department             		wfischer at indiana.edu
Jordan Hall                   		http://www.bio.indiana.edu/~wfischer
Indiana University            		Lab:    812-855-2549
Bloomington, Indiana 47405 USA		FAX:    812-855-6705




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