pairwise alignment program wanted

Ashok Aiyar aiyar at ebv.oncology.wisc.edu
Tue Jun 10 06:29:07 EST 1997


On 10 Jun 1997 09:46:39 GMT,
Xavier De Bolle (Xavier.DeBolle at fundp.ac.be) wrote:

>We currently need a simple program (free of charge, if possible) that
>aligns two DNA sequences 

The programs "align" and "align0" that are part of the FASTA 
distribution will let you align two DNA sequences.  It is free, and 
Macintosh binaries of the FASTA programs are available.

You can retrieve the fasta programs from:
ftp://ftp.virginia.edu/pub/fasta

For multiple alignments on a Mac, you might consider using ClustalX,
available from ftp://ftp-igbmc.u-strasbg.fr/pub/ClustalX. Mac68k and
PowerPC binaries are available.

Later,
Ashok
-- 
Ashok Aiyar, Ph.D.
McArdle Laboratory for Cancer Research
aiyar at ebv.oncology.wisc.edu




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