Proteolytic map, freeware or web site?

Mathew Woodwark mathew.woodwark at
Tue Apr 7 04:48:57 EST 1998

Dear Zeev,

You might like to try ms-digest in proteinprospector. It is part of a
package that using mass spec peptide mass data t identify proteins and one
of the programs allows you to paste in a sequence and have it cut by a
number of proteolytic enzymes

The address is

Might be worth a try...


Mathew Woodwark

Usual disclaimers apply

Zeev Pancer wrote:

> Hi,
> Can anyone refer me to a freeeware or web site that can search a protein
> sequence for clevage-sites of proteolytic enzymes?
> Thanks in advance.
> --
> Zeev Pancer, Ph.D.
> Division of Biology 156-29
> California Institute of Technology
> 1200 E. California Blvd.,
> Pasadena, CA 91125, USA
> Tel: (626) 395-4940
> Fax: (626) 583-8351

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