Translation of protein sequence to nucleotide sequence

Tim Littlejohn tim at angis.usyd.edu.au
Tue Aug 11 06:58:14 EST 1998


Francis has just been working too hard that's all! The only one I know of
off the top of my head is GCG's backtranslate.

Cheers,

Tim



On 11 Aug 1998 francis at ncbi.nlm.nih.gov wrote:

> sorry Tony, you are right, I totally missed your point .. (as Tim
> Littlejohn also pointed out to me) ...Your posting was not ambiguious,
> it was I who missread it ... sorry, I have no suggestions, but others
> may have ...
> 
> regards,
> 
> f.
> 
> --
> | B.F. Francis Ouellette  
> | GenBank Coordinator
> |
> | francis at ncbi.nlm.nih.gov   
> 
> 
> > From mcbaet at mcbsgs1.imcb.nus.edu.sg Tue Aug 11 01:08:09 1998
> > X-Sender: mcbaet at imcb.nus.edu.sg
> > Date: Tue, 11 Aug 1998 13:08:53 +0800
> > To: francis at ncbi.nlm.nih.gov
> > From: Anthony Ting <mcbaet at mcbsgs1.imcb.nus.edu.sg>
> > Subject: Re: Translation of protein sequence to nucleotide sequence
> > 
> > Dear Francis,
> > 
> > 	Thanks for the prompt reply.  While ORF Finder is a nice program.  It does
> > the opposite of what I want.  I already have a protein sequence, what I
> > want to do is convert to nucleotide sequence given a specific codon usage
> > table.  I'm sorry if my original posting was ambiguious.  If you have any
> > suggestions, I'd really appreciate it.  Otherwise, I'm spending the next
> > few days doing it manually.
> > 
> > thanks again,
> > 
> > Tony
> > 
> > 
> > 
> > At 11:53 PM 8/10/98 -0400, you wrote:
> > >
> > >> From: mcbaet at MCBSGS1.IMCB.NUS.EDU.SG (Anthony Ting)
> > >
> > >=->     Is anyone aware of a program that translate a protein 
> > >=-> sequence into
> > >=-> a nucleotide sequence given a specific codon usage table?
> > >
> > >Dear Anthony Ting,
> > >
> > >have a look ORF Finder at:
> > >
> > >http://www.ncbi.nlm.nih.gov/gorf/gorf.html
> > >
> > >I think it will do what you want  (and a little bit more :-)
> > >
> > >cheers,
> > >
> > >francis
> > >
> > >--
> > >| B.F. Francis Ouellette  
> > >| GenBank Coordinator
> > >|
> > >| francis at ncbi.nlm.nih.gov   
> > >
> > >
> > > 
> > >
> > >
> > 
> > -------------------------------------------------------------------
> > Anthony Ting, PhD		      		 phone: 65-874-7846
> > Institute of Molecular and Cell Biology          fax: 65-779-1117
> > 30 Medical Drive
> > Singapore   117609
> > 
> 
> 

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