free/shareware sequence aligment?

Ashok Aiyar aiyar at ebv.oncology.wisc.edu
Mon Aug 31 13:43:05 EST 1998


On Sat, 29 Aug 1998 22:34:45 -0700,
Antonin Tutter (atutter at aim.salk.edu) wrote:
>Hi netters,
>
>does anyone know of a freeware or shareware DNA sequence aligment program
>for the Mac?  I've been using DNAStar and MacVector but they are keyserved
>and I need something I can use when I am away from the lab.

You could use ClustalX.  A PPC binary is available from the URL:
ftp://ftp-igbmc.u-strasbg.fr/pub/ClustalX/clustalx1.64b.PPC.sea.Hqx

Francois Jeanmougin and Julie Thompson are kind enough to make the
source available as well, so presumably you can build an m68k version
if you need to.

Later,
Ashok
-- 
Ashok Aiyar, Ph.D.
McArdle Laboratory for Cancer Research
aiyar at ebv.oncology.wisc.edu




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