PDB amino acid positions

Tom Walsh tpwalsh at acer.gen.tcd.ie
Thu Feb 5 09:07:28 EST 1998


In article <34D98C11.41C6 at cc.huji.ac.il>,
Iddo Friedberg  <idoerg at cc.huji.ac.il> wrote:
>Hi All,
>
>Does anybody know of a good, robust  program which will accept a PDB
>file as input, and for the output deliver for each amino acid it's PDB
>position number. Including such vagaries as negative numbering (some
>files have them), and non-numerical positions (as in serine proteinases,
>where there are such things as 65A). 
>

 If I've understood the problem correctly, it should be trivial in AWK.

   Tom Walsh

>Please reply by email, as well as to this newsgroup.
>
>
>Many thanks,
>
>Iddo
>


-- 

 - You talk to me of nationality, language, religion. I shall try to fly by 
   those nets.




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