DNA/Protein homology search

Francois Jeanmougin pingouin at chouchen.u-strasbg.fr
Tue Feb 10 04:01:39 EST 1998


In article <6bmm8s$s6$1 at kadri.ut.ee>,
	mremm at tamm.eenet.ee (Maido Remm) writes:

> 1. Query and target are DNA
> 2. Translate both sequences correctly to protein sequence
> 3. Align protein sequences
> 4. Output the same alignment as DNA sequence

	Seems to be the job of tblastx, no?

						François.

-- 
François Jeanmougin     | groupe de bioinformatique / bioinformatics groupe
tel:(+33) 3 88 65 32 71 | IGBMC BP 163 67404 Illkirch France




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