FramePlot 2.0
ISHIKAWA Jun
jun at nih.go.jp
Mon Feb 16 02:40:26 EST 1998
FramePlot, a web-based protein-coding region prediction tool for
high GC-content bacteria, is updated to version 2.0, and is
currently in a beta-test. Please check out the following URL:
http://www.nih.go.jp/~jun/cgi-bin/frameplot.pl
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New features of version 2.0
=============================================================
Clickable Map:
You can get nucleotide and amino acid sequence (FASTA
format) of the ORF you interested by clicking the graph.
BLAST Gateway:
And you can submit the sequence immediately to the NCBI
BLAST server.
Step Size:
"Window" is moved along the sequence by the set "step size".
Larger step size makes FramePlot run much faster. But it
will produce low resolution plot.
Auto Image Width:
"Image width" is adjusted automatically.
=============================================================
Comments are very much appreciated.
Thank you.
--
ISHIKAWA Jun, Ph.D. Natl. Inst. of Infectious Diseases
(jun at nih.go.jp) Dept. of Bioactive Molecules
AUCUCCCACAUCAAAGCUUGGGCU Tokyo, JAPAN
http://www.nih.go.jp/~jun/research/
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