PDB -> SwissPROT conversion?

Catherine Letondal letondal at pasteur.fr
Fri Jun 5 04:34:42 EST 1998



In article <6l7588$j4n$1 at netnews.upenn.edu>, alwang at blue.seas.upenn.edu (Al Wang) writes:
>Hi,
>
>Does anyone know what's a good way to take a Brookhaven PDB file, extract 
>the sequence information, and save it in SwissPROT format?  If it can 
>also extract the secondary structure features, even better.  
>
>Thanks,
>Al

I am looking for the same kind information. There is a description of a program called
PDB2PIR on the PIR Web (see http://nbrfa.georgetown.edu/pir/software.html)
but it has not been put on their ftp server.
I am waiting for an answer from the author of the program (Dr. John S. Garavelli, 
Associate Director of PIR).

Regards,

>__________________________________________
>al wang
>alwang at doubt.com
>http://www.seas.upenn.edu/~alwang/
>
>"What's My Solution?" 
>"Noise Pollution!"
>





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