Software to find promotors

Andrey Ptitsyn andrey at sanbi.ac.za
Mon Mar 9 04:17:58 EST 1998


Hi Mark,
Most advanced gene-finging systems in the Web tend to include promoter
and 3' region recognition. Have a look at GRAIL 
http://compbio.ornl.gov/Grail-bin/EmptyGrailForm
or Genefinder
http://genomic.sanger.ac.uk
You can also download AutoGene, which is for PC/MS DOS,
ftp://ftp.bionet.nsc.ru/pub/biology/AUG
Good luck,
Andrey

Mark Gosink wrote:
> 
> Dear Netters:
>         Can anyone enlighten me as to any bioinformatic tools for looking
> for and analyzying promotors (or other non-coding region structures)
> in genomic sequences.
>         Thanks,
> Mark
> 
>  -------------------------------------------------------------
>   Dr. Mark Gosink
>   Dept. of Horticulture      Email: mmgosink at facstaff.wisc.edu
>   University of Wisconsin
>   1575 Linden Dr.            Phone: (608)262-1622
>   Madison, WI 53706          FAX:   (608)262-4743
>  -------------------------------------------------------------




More information about the Bio-soft mailing list