Aligning a new sequence to an existing alignment??
learn at u.washington.edu
Thu Mar 19 12:58:23 EST 1998
In article <35114E52.41C6 at uiuc.edu>, Steve Johnson <sljohnsn at uiuc.edu> wrote:
> I have an alignment from PILEUP that I want to add additional sequences
> to. I have done some hand editing that I don't want to have to redo
> everytime I do a new PILEUP. Does anyone know of software that would
> allow me to do this? Thanks.
I use clustalw version 1.7 for this purpose (option 3 Profile/Structure
Alignments). It's available at ftp.ebi.ac.uk in the directory
/pub/software/<paltform>/clustalw, where <platform> is dos, mac, unix or
Jerry Learn <Learn at u.washington.edu>
Dept. of Microbiology
University of Washington
Seattle, WA 98195-7740 USA
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