Shuffling sequences

Eivind Coward coward at genetique.uvsq.fr
Wed Nov 18 09:43:15 EST 1998


I am looking for a freely available program that generates random
shufflings of a sequence, conserving the k-let frequencies (for example,
dinucleotide frequencies in a DNA sequence). Algorithms for this have
been published, but I have not yet found an implementation.

I am grateful for any information.

Yours,
Eivind Coward




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