Help, Rasmol installation on Linux

Sung-Joo Lee sjlee at ocf.Berkeley.EDU
Sun Oct 11 19:33:40 EST 1998


Hi,

I am having trouble installing Rasmol 2.6b2 on Redhad Linux 5.1 running
on a Dec Alpha. 
(ftp://marlin.bio.umass.edu/pub/shareware/rasmol/distrib/RasMol26b2.tar.gz)


Has anybody had similar problems?

This is what i get after doing everything I'm supposed to do.
################
141 % make
gcc -O2     -I/usr/X11R6/include -I/include  -Dlinux -D__alpha__
-D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE=500L
-D_BSD_SOURCE -D_SVID_SOURCE   -DFUNCPROTO=15 -DNARROWPROTO
-DRASMOLDIR=\"/usr/home/sjlee/bin/RasMol2/\" -DEIGHTBIT   -c rasmol.c -o
rasmol.o
rasmol.c: In function `OpenConnection':
rasmol.c:329: invalid use of undefined type `struct fd_set'
rasmol.c: In function `CloseConnection':
rasmol.c:345: invalid use of undefined type `struct fd_set'
rasmol.c: In function `InitTerminal':
rasmol.c:394: warning: type mismatch in implicit declaration for built-in
function `memset'
rasmol.c:395: invalid use of undefined type `struct fd_set'
rasmol.c:401: invalid use of undefined type `struct fd_set'
rasmol.c:411: invalid use of undefined type `struct fd_set'
rasmol.c: In function `FetchCharacter':
rasmol.c:497: `WaitSet' has an incomplete type
rasmol.c:503: warning: passing arg 2 of `select' from incompatible pointer
type
rasmol.c:503: warning: passing arg 3 of `select' from incompatible pointer
type
rasmol.c:503: warning: passing arg 4 of `select' from incompatible pointer
type
rasmol.c:508: invalid use of undefined type `struct fd_set'
rasmol.c:512: invalid use of undefined type `struct fd_set'
rasmol.c:516: invalid use of undefined type `struct fd_set'
rasmol.c: At top level:
rasmol.c:112: storage size of `OrigWaitSet' isn't known
rasmol.c:113: storage size of `WaitSet' isn't known
make: *** [rasmol.o] Error 1

############

Thanks for reading this far,
SJ

-- 
Sung-Joo Lee
Chakraborty Group,
College of Chemistry
Graduate Group in Biophysics
University of California, Berkeley






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