PAM matrix

CAIS cais1 at netvigator.com
Wed Sep 30 03:08:12 EST 1998


Hi all:

The numbers in the PAM250 matrix were multipled by 10. I am wondering
whether the numbers in the other PAM matrices e.g. PAM120 were also
multipled by 10 or other factors. Can we compare the log odd ratios for
any pair of amino acids across different PAM matrices or different
BLOSUM matrices.

Thanks.

Brian





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