Transmembrane prediction

Joe Ryan jfryan at NHGRI.NIH.GOV
Wed Dec 1 16:41:18 EST 1999

> I'm looking for a transmembrane prediction program, the source code
> should be free available for academic use. I've to install the program
> on site for large scale use so I can't use a web-service. I've already
> tried MEMSAT and TOPPRED2. Both programs seem to overpredict
> transmembrane helices in some sequences.

This is from an old post to this group.

:> I am looking for software that can predict transmembrane domains in
:> proteins.
:Here is a list in no particular order:
:(TMBASE is A Database of Membrane Spanning Protein Segments)
:  Joe
:Joseph Ryan
:National Human Genome Research Institute

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