Transmembrane prediction

Catherine Letondal letondal at
Thu Dec 2 10:25:51 EST 1999

You could as well use the BioNetbook :
and ask for the word: membrane

or directly:

In article <19991201163353.A976 at>, jfryan at NHGRI.NIH.GOV (Joe Ryan) writes:
>> I'm looking for a transmembrane prediction program, the source code
>> should be free available for academic use. I've to install the program
>> on site for large scale use so I can't use a web-service. I've already
>> tried MEMSAT and TOPPRED2. Both programs seem to overpredict
>> transmembrane helices in some sequences.
>This is from an old post to this group.
>:> I am looking for software that can predict transmembrane domains in
>:> proteins.
>:Here is a list in no particular order:
>:(TMBASE is A Database of Membrane Spanning Protein Segments)
>:  Joe
>:Joseph Ryan
>:National Human Genome Research Institute

Catherine Letondal -- Pasteur Institute Computing Center

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