Help! Software to extract motif from alignment produced by CLUSTAL W.

Reinhard Doelz reinhard at doelz.com
Wed Jan 13 13:09:42 EST 1999


Hi, 
clustalw can write GCG's MSF format, which is in turn recognized by many
software packages
(including GCG's if you have access to a licensed copy :-) ) 
You might try to use SEALS, which is free software, released into the
public domain.
(http://www.ncbi.nlm.nih.gov/Walker/SEALS/index.html) I haven't tried it
myself, though.

regards
Reinhard 

xietao wrote:
> 
> Daer All:
> 
> Could somebody tell me a free software(PC or UNIX) which is good
> 
> at extracting motifs from sequence alignment produced by CLUSTAL W?
>




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