Batch BLAST

Yves TOURMEN YvTourmen at chu-angers.fr
Thu Jul 29 08:26:54 EST 1999


Chris Upton a écrit dans le message ...
>Hi,
>   Is there a simple way to send off 200 blast searches to NCBI or other
>server and have them return the results in HTML or text format?
>
>Thanks,
>  Chris
>--
>Dept Biochemistry and Microbiology
>University of Victoria
>Victoria BC

There is another solution :
if you have a "telnet acces" on a databank server you can write a shell
which runs Blast with all the possible options in a batch and put the output
in a file. The options are described with the command well known under Unix
: man blast

yvtourmen at chu-angers.fr






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