Parsing BLAST output

Andrew Dalke dalke at bioreason.com
Tue Mar 23 00:31:21 EST 1999


Michael Rogoff wrote:
> Are there any publically available parsers for BLAST output,
> preferably in Java?

There are Perl parsers from bio.perl.org, and I recall Wayne
Parrott <wayne at workingobjects.com> saying they have a Java parser
from WorkingObjects.com. [Checking URL...]  Yep, they do, but
I've never tried it.

						Andrew Dalke
						dalke at acm.org




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