Need help for Software that can do codon usage analysis

Andrew T. Lloyd atlloyd at tcd.ie
Thu Nov 11 13:00:27 EST 1999


In article <1103_942159570 at oboe>, zw2 at duke.edu (Zhong Wang) wrote:

> Hi,
> 
> Anybody knows about software that can do codon usage analysis? I
remember MacVector can do it, this way it is much easier to pick up a
frameshift mutation in your 
> DNA sequence. But I am working on IBM PC, there should be a software
like that. 
> Thanks.

ftp://www.ie.embnet.org/cod/codons14.exe
ftp://www.ie.embnet.org/cod/README

Will analyse (to exhaustion) your ORF.  Written for DOS.
I think Windows should be backwardly compatible.

Andrew
-- 
Andrew T. Lloyd  Irish National Centre for BioInformatics  INCBI
atlloyd at tcd.ie       EMBnet Ireland       http://acer.gen.tcd.ie
     





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