automating mac->UNIX ABI data

Joe Ryan jfryan at NHGRI.NIH.GOV
Thu Oct 14 07:33:38 EST 1999


Have a look at 

    ftp://ftp.nhgri.nih.gov/pub/software/webblast/mac/

The Sequence uploader is part of the NHGRI WebBLAST package but can
be used as an independant module.  For more information on WebBLAST see

    http://genome.nhgri.nih.gov/webblast/

Good Luck,

Joe
--
Joseph Ryan -- Programmer -- National Human Genome Research Institute

On Wed, Oct 13, 1999 at 08:43:46PM -0700, Chris Botka wrote:
> 
> Hi,
> 
> I am novice on this particular subject, so if this is a silly  
> question, apologies in advance.
> 
> I have been asked by some folks who use our resource about  
> automating uploads of ABI (377) base calls and raw sequence data to  
> a UNIX host.
> 
> I figure *someone* must have some scripts etc. to do this.  Issues  
> are: automation on the mac side (Applescript MacPerl?), naming  
> conventions, and compression??...
> 
> Thanks,
> 
> Chris
> 
> ________
> 
> Christopher W Botka			Phone: (415)476-5379
> Sequence Analysis Consulting Service	Fax: (415)502-1755
> UCSF Computer Graphics Lab		Office: Lib-111
> Internet: botka at cgl.ucsf.edu		Mail Drop: Box 0446
> http://www.sacs.ucsf.edu/		NeXT/MIME mail OK
> 




More information about the Bio-soft mailing list