Software for viewing (and editing) ABI files on Windows

Tom Hall tahall2 at unity.ncsu.edu
Fri Oct 29 10:23:12 EST 1999


ABI editing capability has been added to BioEdit (v4.7.7 on 10/29/99).  Also, the
edited sequence may be reverted to the original, non-editable sequence at any
time.  The edited sequence is extracted to a sequence/alignment document upon
opening of an ABI file.

(http://www.mbio.ncsu.edu/RNaseP/info/programs/BIOEDIT/bioedit.html)

Hope this works out for someone or anyone.

Tom Hall

John Barlow wrote:

> A number of people asked about software that allows viewing of ABI trace files
> (chromatograms) on the Windows platform.  There are quite many choices - some
> programs allow viewing and printing only, others provide sophisticated tools
> for contig assembly and proofreading.  Some programs are free (and very good -
> see BioEdit), other cost several thousands of dollars and are difficult to use,
> or have a confusing interface resulting from porting from the Mac.
>
> 1. BioEdit - free Windows ABI trace viewer with a lot of interesting functions
> (http://www.mbio.ncsu.edu/RNaseP/info/programs/BIOEDIT/bioedit.html).  Try this
> first.
>
> 2. ABIView - a free Windows viewer for ABI traces
> (http://users.cloud9.net/~dhk/abiview.html)
>
> 3. Chromas - a shareware Windows trace viewing package for $50
> (http://www.technelysium.com.au/chromas.html)
>
> 4. SeqMan II from the Lasergene package (http://www.dnastar.com/) - a good
> program costing ony about 1/5 of the price of another contender - Sequencher
> (http://www.genecodes.com/).  I routinely use SeqMan II to view, print,
> assemble, and proofread contigs from ABI traces.
>
> Cheers,
> John





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