EMBOSS user interface?

Peter Rice pmr at sanger.ac.uk
Thu Jun 15 03:26:30 EST 2000


t.j.keen at leeds.ac.uk (Jeffrey Keen) writes:

> In article <8i5csj$qj5$1 at franklin.ljcrf.edu>,
> greg at franklin.burnham-inst.org (Dr. Greg Quinn) wrote:
> 
> > Has anyone written or know of a user interface for the EMBOSS 
> > package, either Web, terminal or X-windows? 
> 
> Take a look at:
> 
> http://www.sanger.ac.uk/Software/EMBOSS/Doc/interfaces.shtml

There is another page where we are starting a more detailed description:

http://www.sanger.ac.uk/Software/EMBOSS/Interfaces/

PISE (see Catherine Letondal's reply) is the first reasonably complete
interface. We aim to support as many interface developers as possible.
In many cases they have not been actively working on including
EMBOSS, but we know that for most of them we can automate the process
of adding each new application. 

The interfaces listed so far are:

   Web:   Pise, W2H, www2gcg, AppLab, SRSWWW, BioNavigator, 
   GUI:   CoLiMate, Staden, DISguiSE, SeqPup, 
 Other:   CINEMA, Acedb, Perl, WinNT


If you know of other interfaces we should include, please let us know.

-- 
----------------------------------------------------------------------
Peter Rice                | Informatics Division, The Sanger Centre,
E-mail: pmr at sanger.ac.uk  | Wellcome Trust Genome Campus,
Tel: (44) 1223 494967     | Hinxton, Cambridge, CB10 1SA, England
Fax: (44) 1223 494919     | URL: http://www.sanger.ac.uk/Users/pmr/







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