BLAST jobs crashing - any ideas?

Kevin Karplus karplus at cse.ucsc.edu
Wed Mar 8 15:04:53 EST 2000


In article <8a5u30$cdh$1 at niobium.hgmp.mrc.ac.uk>, gwilliam at hgmp.mrc.ac.uk (Gary Williams) writes:
|> Our sysadmin (Peter Tribble) says:
|> 
|>  Getting NCBI blast to actually run reliably seems rather difficult.
|>  Most of the benchmarks I've run have crashed out"
|> 

This makes me glad I'm running wu-blastp, even if it does still report
P-values instead of the more useful E-values.  Have the NCBI problems
been with protein searches or with nucleic-acid searches?

-- 
Kevin Karplus 	karplus at cse.ucsc.edu	http://www.cse.ucsc.edu/~karplus
life member (LAB, Adventure Cycling, American Youth Hostels)
Effective Cycling Instructor #218-ck
Anything below this line is junk added by others without my approval.
-- 
Kevin Karplus 	karplus at cse.ucsc.edu	http://www.cse.ucsc.edu/~karplus
life member (LAB, Adventure Cycling, American Youth Hostels)
Effective Cycling Instructor #218-ck
Anything below this line is junk added by others without my approval.





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