[bio] Re:Sequence annotation

Crepineau crepinau at sb-roscoff.fr
Tue Mar 14 17:54:51 EST 2000


Hello,

have a look at ACEDB. http://www.sanger.ac.uk/Software/Acedb/

that might be what you want.

Florent

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A colegue is starting a mini sequenceing project. about 6 10kb reagions
from a few different species.

I was wondering what sort of software is available to maintain the
contigs
and also to annotate them so the output look much like this

http://genome-www4.stanford.edu/cgi-
bin/SDEV/ORFMAP/ORFmap?chr=5&beg=100000&end=110000&sage=0

i dont care what platform win98 or mac is best, but linux or other UNIX
flavour can be dealt with.

thanks

Aidan

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