Alternative to GCG program findpatterns

Johanne Duhaime duhaimj at ircm.qc.ca
Wed May 24 14:03:17 EST 2000


Hi

I am looking for a web site where it would be possible to do the same
type of analysis that does findpatterns (GCG).  In other words, I would
like to give a pattern (ex:  GAT(TG){,2}) and a databank (genbank) as a
target. The program would allow mismatches (at the user requested) and
returned all the sequences that contain the pattern.

Findpatterns is a very good program but it need to have the databanks
installed locally.

Thank you in advance

--
Johanne Duhaime









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