blast parser c(++)

[David Martin]

On Wed, 15 Nov 2000, Thomas Schaefer wrote:

> Hi,
>
> does anyone know a blast parser? I need source code which reads blast
> output into data structures in my own software package.

You could try btab. It works very nicely and breaks a blast search into a
tab delimited format.

..d


>
> Thanks a lot,
> Thomas
>
>

---------------------------------------------------------------------
*  Dr. David Martin                  Biotechnology Centre of Oslo   *
*  Node Manager                      Gaustadalleen 21               *
*  The Norwegian EMBNet Node         P.O. box 1125 Blindern         *
*  tel +47 22 84 05 35               N-0317 Oslo                    *
*  fax +47 22 84 05 01               Norway                         *
---------------------------------------------------------------------