Sequence alignment

Erik Arner erik_arner at my-deja.com
Tue Oct 24 03:59:20 EST 2000


In article <8s9lhi$jn6$1 at unlisys.unlisys.net>,
  "Ulrik" <Ulriks at ruc.dk> wrote:

> I am trying to align different sequences from the genebank. The best
> program I've found so far is BioEdit (Im using PC - Windows or
> Linux), which uses ClustalW to align sequences. I've managed to align
> two sequences (one of 930 bp, theother of 2220 bp) with ClustalW,

If you only want to do pairwise alignment, I suggest that you try BLAST
at

http://www.ncbi.nlm.nih.gov/BLAST/

HTH,

Erik


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